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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015823693.1_cds_XP_016501581.1_15296
CDS Infomation

[gene=LOC107819913] [db_xref=GeneID:107819913] [protein=D-2-hydroxyglutarate dehydrogenase, mitochondrial-like] [protein_id=XP_016501581.1] [location=join(4510..4615,5590..5933,6049..6150,6504..6551,6759..6829,7358..7476,7768..7863,7949..8058,8151..8231,8576..8676,9792..9900,11104..11209,11520..11605,11684..11809,12579..12674,12764..12778)] [gbkey=CDS]
Sequence

ATGGAGGACTGGAGAGCGACCTACCGTTTACTTGCACACTGCAAACACATTTTTCATGGC
CGATCAAGCCCTAATTTTCACAATTCAAAACGTTTTTGCAGCTCAGGTCATAGGTATCAT
TTTAACCAACCTTCTGAGCCGATAAATCCTTATATTGGTAATTACCAACAAGAATTTCAA
ACATATAAACAACCCTCACTATCTCTGGGTATTAATCAGCGGTACAGATGCAGAAGCCAT
TATAGATGTTTTGCTTCTCAGGCCACCATTATTCAGAGAAGACCAGATTTTTCAACAATT
AGCTCAGAAGACGTGAGCTATTTCAAGAAGATATTAGGGGAAAGAGGGGTAGTTCAGGAT
GAGGAGACACTGGATGCTGTGAACACGGATTGGATGAGGAAATACAAGGGCACCAGTAAG
CTCATGCTCCAACCTCGGTCAGCAGAGGAGGTCTCTCAGATTCTTAAATATTGCAATTCC
AGATGCCTAGCTGTTGTTCCTCAAGGGGGGAATACAGGTCTTGTGGGAGGAAGTGTGCCT
GCTTTTGATGAGGTGATAGTTAATACCAGTCATATGAATAAAATCATTTCTTTCGACAAG
GTTAGCGGCATACTGGTTTGTGAGGCAGGATGCATTTTGGAAACTCTCATTGCTTTTCTT
GATAACCAAGGGTTTGTTATGCCACTAGATTTAGGTGCTAAAGGAAGCTGTCAAATTGGA
GGAAATGTCTCAACCAATGCTGGTGGTTTGCGGCTTCTCCGCTATGGTTCACTGCATGGC
AGCGTCCTTGGTCTTGAAGTGGTTTTAGCAAATGGAACGGTGCTTGATATGCTCGGCACA
CTGCGAAAAGATAACACTGGATATGACTTAAAACATTTATTTATAGGAAGTGAAGGATCC
TTGGGTATTGTAACGAAGGTTTCCATACTAACTCCTCCAAAGCTGTCCTCTGTAAATGTG
TGCTTTCTTGCTTGTTCCGATTATGCAAGCTGCCTGAAACTTTTGTTAGACGCGAAGAGG
AAACTTGGGGAAATTCTTTCTGCATTTGAATTTCTTGATCATGATGCAATGGATCTGGTC
CTGAAGCATTTAGAAGGTGTCCGTAATCCATTTCCTTCCTCAATGCATAACTTTTATGTT
CTGATTGAGACAACTGGCAGTAGTGAATCTTATGACAGAGAGAAACTGGATGCTTTCTTG
CTTCACTCAATGGAAAATGGCTTGATAAGTGATGGAGTTGTTGCACAAGATATAACTCAG
GCATCTTCTTGCTGGCATATTCGTGAGGGCATTCCTGAAGCTTTGATGAAGGAAGGAGGT
GTATATAAATATGATTTGTCAATACCGGTTGAAACAATGTATGATCTTGTTGAGGAAATG
CGAGTCCGACTTGATGCTTCAGCAAAAGTAGTTGCTTATGGTCACCTTGGGGATGGCAAC
TTACATCTTAATATCTCAACTCCTCAGTATGATGATAATATTTTATCACAGATCGAGCCT
TTCGTTTATGAATGGACTTCTAAGCACAAAGGGAGTATTAGCGCCGAACATGGCCTTGGA
CTGATGAAAGCCAATAAAATCCATTACAGCAAGTCACCTGAAACTGTGCAACTAATGGCT
TCTATTAAGAAGCTACTGGACCCTAATGGAATTCTGAACCCATATAAAGTTCTCCCGCCT
TCCCTTTTCTCAAAAGCTGAGATTTATACAGAATGA

Peptide Sequence

PEP ID

XP_016501581.1
PEP Infomation

PREDICTED: D-2-hydroxyglutarate dehydrogenase, mitochondrial-like [Nicotiana tabacum]
Sequence

MEDWRATYRLLAHCKHIFHGRSSPNFHNSKRFCSSGHRYHFNQPSEPINPYIGNYQQEFQ
TYKQPSLSLGINQRYRCRSHYRCFASQATIIQRRPDFSTISSEDVSYFKKILGERGVVQD
EETLDAVNTDWMRKYKGTSKLMLQPRSAEEVSQILKYCNSRCLAVVPQGGNTGLVGGSVP
AFDEVIVNTSHMNKIISFDKVSGILVCEAGCILETLIAFLDNQGFVMPLDLGAKGSCQIG
GNVSTNAGGLRLLRYGSLHGSVLGLEVVLANGTVLDMLGTLRKDNTGYDLKHLFIGSEGS
LGIVTKVSILTPPKLSSVNVCFLACSDYASCLKLLLDAKRKLGEILSAFEFLDHDAMDLV
LKHLEGVRNPFPSSMHNFYVLIETTGSSESYDREKLDAFLLHSMENGLISDGVVAQDITQ
ASSCWHIREGIPEALMKEGGVYKYDLSIPVETMYDLVEEMRVRLDASAKVVAYGHLGDGN
LHLNISTPQYDDNILSQIEPFVYEWTSKHKGSISAEHGLGLMKANKIHYSKSPETVQLMA
SIKKLLDPNGILNPYKVLPPSLFSKAEIYTE

Transcript Sequence

Gene sequence data has not been registered.